snpFragPos,chromosome,exact_SNP_position,WELL,TERM,SNP_ID,X2nd.PCRP,X1st.PCRP,AMP_LEN,UP_CONF,MP_CONF,Tm.NN.,PcGC,PWARN,UEP_DIR,UEP_MASS,UEP_SEQ,EXT1_CALL,EXT1_MASS,EXT1_SEQ,EXT2_CALL,EXT2_MASS,EXT2_SEQ,EXT3_CALL,EXT3_MASS,EXT3_SEQ,EXT4_CALL,EXT4_MASS,EXT4_SEQ
1-23155464,CHR1,23155780,W1,iPLEX,AtMSQTsnp 85,ACGTTGGATGGTTCCATAGTCCACTCGAGC,ACGTTGGATGAACGAGGCACAAAAGGGAAG,113,97.9,76.3,45.3,64.3,d,F,4137.7,CGAACCAACCTCCC,A,4408.9,CGAACCAACCTCCCA,T,4464.8,CGAACCAACCTCCCT,NA,NA,NA,NA,NA,NA
5-26120843,CHR5,26120955,W1,iPLEX,AtMSQTsnp 410,ACGTTGGATGTTTTTTCTCCGCCGCCGTAG,ACGTTGGATGTACTCCCAGATGTTTGACGC,113,97.9,76.3,50.8,71.4,D,F,4224.8,GCGTGTCCAACGCC,A,4496,GCGTGTCCAACGCCA,G,4512,GCGTGTCCAACGCCG,NA,NA,NA,NA,NA,NA
5-5005363,CHR5,5005750,W1,iPLEX,AtMSQTsnp 350,ACGTTGGATGAAACCAGAAGCCAGTGAGAG,ACGTTGGATGTTGTCGTTGGTTGTGGGAAG,103,100,76.3,46.2,57.1,,F,4352.8,AGAGAGCGTGCGTA,A,4624.1,AGAGAGCGTGCGTAA,G,4640.1,AGAGAGCGTGCGTAG,NA,NA,NA,NA,NA,NA
1-2775589,CHR1,2775956,W1,iPLEX,AtMSQTsnp 14,ACGTTGGATGCTATAGTCTATGTTCCGAAG,ACGTTGGATGCTTTGGATAGAAGGACAGAG,99,93,76.3,47.8,60,d,R,4544,TTCCGAAGTGGTCCC,T,4815.2,TTCCGAAGTGGTCCCA,A,4871.1,TTCCGAAGTGGTCCCT,NA,NA,NA,NA,NA,NA
4-17038096,CHR4,17038400,W1,iPLEX,AtMSQTsnp 307,ACGTTGGATGTCCAAAGATACCTCTCGCAC,ACGTTGGATGTCAAAGTTGCAGCCAGTACG,100,100,76.3,46.8,60,D,R,4762.1,cCACTTTCCGAGCACC,T,5033.3,cCACTTTCCGAGCACCA,A,5089.2,cCACTTTCCGAGCACCT,NA,NA,NA,NA,NA,NA
3-23053771,CHR3,23053878,W1,iPLEX,AtMSQTsnp 244,ACGTTGGATGGAGTCGTTTACCGGTACTGC,ACGTTGGATGCATCTTCAGGACTTAGACGC,100,98.6,76.3,48.4,56.3,,F,4995.3,GCGAGATGGAACGGTA,A,5266.5,GCGAGATGGAACGGTAA,G,5282.5,GCGAGATGGAACGGTAG,NA,NA,NA,NA,NA,NA
2-15801112,CHR2,15801542,W1,iPLEX,AtMSQTsnp 169,ACGTTGGATGAGGAACATCCTCTCTTCGTC,ACGTTGGATGTTTTCGTAACACGGTTTCGC,120,97,76.3,48.4,52.9,D,R,5134.3,TCTTCGTCTTCTCGTGG,G,5381.5,TCTTCGTCTTCTCGTGGC,T,5405.5,TCTTCGTCTTCTCGTGGA,NA,NA,NA,NA,NA,NA
2-1798324,CHR2,1798445,W1,iPLEX,AtMSQTsnp 123,ACGTTGGATGGACGTAGAGTTCACGATTCC,ACGTTGGATGAATTTCATGTCCTTGAATC,103,79.4,76.3,47.3,50,DH,F,5170.4,gTCACGATTCCCATGGA,A,5441.6,gTCACGATTCCCATGGAA,G,5457.6,gTCACGATTCCCATGGAG,NA,NA,NA,NA,NA,NA
5-23270845,CHR5,23270994,W1,iPLEX,AtMSQTsnp 404,ACGTTGGATGTTTGGATTCCAGGCAAACCC,ACGTTGGATGCCAGGAGAAGGGTTATGAAG,100,100,76.3,45.1,46.7,D,R,5230.4,gaAAACCCGAAAGCAGA,T,5501.7,gaAAACCCGAAAGCAGAA,C,5517.7,gaAAACCCGAAAGCAGAG,NA,NA,NA,NA,NA,NA
1-13711856,CHR1,13712241,W1,iPLEX,AtMSQTsnp 63,ACGTTGGATGTTGCTTCTATTTCCTCGTCG,ACGTTGGATGGATTCTAGGTAACATCGGTAG,91,89.9,76.3,46.3,60,Dh,R,5337.5,ctcCCTCGTCGATCTCCT,C,5624.7,ctcCCTCGTCGATCTCCTG,A,5664.6,ctcCCTCGTCGATCTCCTT,NA,NA,NA,NA,NA,NA
5-7881187,CHR5,7881430,W1,iPLEX,AtMSQTsnp 361,ACGTTGGATGCTTAGCTGAAGGCTAGTGAG,ACGTTGGATGATGTCGTTGGAGCGTAATGG,103,100,76.3,47,47.1,D,R,5554.6,cAGGCTAGTGAGTGACTT,G,5801.8,cAGGCTAGTGAGTGACTTC,A,5881.7,cAGGCTAGTGAGTGACTTT,NA,NA,NA,NA,NA,NA
2-8370574,CHR2,8371133,W1,iPLEX,AtMSQTsnp 138,ACGTTGGATGTGGAGCTTGCAGCAGGTTTG,ACGTTGGATGACGACATCCAGTTTGAGACC,107,98.4,76.3,45.8,44.4,,F,5587.7,CAGGTTTGGAAGCATAAG,C,5834.8,CAGGTTTGGAAGCATAAGC,T,5914.8,CAGGTTTGGAAGCATAAGT,NA,NA,NA,NA,NA,NA
3-11398071,CHR3,11398207,W1,iPLEX,AtMSQTsnp 220,ACGTTGGATGGGATGCTTCACATGAATCAC,ACGTTGGATGGCTGCAGCTGGTAAGAAAC,93,96.8,76.3,45.7,36.8,d,F,5764.8,TCACATGAATCACTAGACA,A,6036,TCACATGAATCACTAGACAA,G,6052,TCACATGAATCACTAGACAG,NA,NA,NA,NA,NA,NA
2-17121159,CHR2,17121378,W1,iPLEX,AtMSQTsnp 174,ACGTTGGATGGCCAAGTACATCGATGACTC,ACGTTGGATGTTAACGAACCTAAGCGGCTC,97,100,76.3,48.1,42.1,D,R,5984.9,cTCGATGACTCTTCTTCCTT,G,6232.1,cTCGATGACTCTTCTTCCTTC,A,6312,cTCGATGACTCTTCTTCCTTT,NA,NA,NA,NA,NA,NA
4-17608717,CHR4,17608924,W1,iPLEX,AtMSQTsnp 310,ACGTTGGATGAATTGTACCTGGTAAAAAAA,ACGTTGGATGTACTGGTAAACGACTATGAC,120,63,76.3,47.1,35,d,F,6127,ACCTGGTAAAAAAACCAATG,C,6374.2,ACCTGGTAAAAAAACCAATGC,A,6398.2,ACCTGGTAAAAAAACCAATGA,NA,NA,NA,NA,NA,NA
4-2440917,CHR4,2441217,W1,iPLEX,AtMSQTsnp 254,ACGTTGGATGGATTCATATGAAACTGTTGTG,ACGTTGGATGCTATGTTACGCATCTGTGAG,100,82.5,76.3,46.2,40,d,R,6178,GTTGTGAATCTTTAGACTGG,C,6465.2,GTTGTGAATCTTTAGACTGGG,A,6505.1,GTTGTGAATCTTTAGACTGGT,NA,NA,NA,NA,NA,NA
2-13265029,CHR2,13265124,W1,iPLEX,AtMSQTsnp 159,ACGTTGGATGACACTATGGTGATATGGCTG,ACGTTGGATGTTGGTGTAGCAGCTATCTCC,107,98.4,76.3,51.4,50,D,R,6268.1,TGGTGATATGGCTGAGGTAG,T,6539.3,TGGTGATATGGCTGAGGTAGA,C,6555.3,TGGTGATATGGCTGAGGTAGG,NA,NA,NA,NA,NA,NA
1-25717715,CHR1,25717887,W1,iPLEX,AtMSQTsnp 100,ACGTTGGATGGCGAGGCTCAGATGGTTATC,ACGTTGGATGAGGATGTCGACGTCTTTAGG,102,98.5,76.3,45.3,50,D,R,6429.2,gccgcTGGTTATCTTCGAGGC,G,6676.4,gccgcTGGTTATCTTCGAGGCC,A,6756.3,gccgcTGGTTATCTTCGAGGCT,NA,NA,NA,NA,NA,NA
1-23893276,CHR1,23893336,W1,iPLEX,AtMSQTsnp 90,ACGTTGGATGATAGTTTTGTTGCAAACCC,ACGTTGGATGTGTTCAGATTTTCTCCACCG,81,85.4,76.3,46.2,38.9,d,F,6601.3,acccTTGCAAACCCTACAAAAC,C,6848.5,acccTTGCAAACCCTACAAAACC,T,6928.4,acccTTGCAAACCCTACAAAACT,NA,NA,NA,NA,NA,NA
1-992824,CHR1,993374,W1,iPLEX,AtMSQTsnp 8,ACGTTGGATGGACCGACATTGTTTACTTTGG,ACGTTGGATGTCACTGACGTGGCGAAAA,120,83.5,76.3,51.1,36.4,D,R,6715.4,TTTGGTCAAATATGCAGTCCTT,G,6962.6,TTTGGTCAAATATGCAGTCCTTC,A,7042.5,TTTGGTCAAATATGCAGTCCTTT,NA,NA,NA,NA,NA,NA
5-26379717,CHR5,26379972,W1,iPLEX,AtMSQTsnp 412,ACGTTGGATGGTTTCTGTGAATAGTGAAG,ACGTTGGATGCCAATCATGAAAGCATATA,83,67.3,76.3,48.3,36.4,D,R,6813.5,TCTGTGAATAGTGAAGTTCAAG,T,7084.7,TCTGTGAATAGTGAAGTTCAAGA,A,7140.6,TCTGTGAATAGTGAAGTTCAAGT,NA,NA,NA,NA,NA,NA
1-13541490,CHR1,13541648,W1,iPLEX,AtMSQTsnp 62,ACGTTGGATGCAGCTTATCCTGCATCAGAC,ACGTTGGATGGAGTTGGTATGATCATGACG,115,97.7,76.3,45.9,36.8,,R,6994.6,tcccGCATCAGACAAACAGTAAA,G,7241.8,tcccGCATCAGACAAACAGTAAAC,A,7321.7,tcccGCATCAGACAAACAGTAAAT,NA,NA,NA,NA,NA,NA
5-26707937,CHR5,26708459,W1,iPLEX,AtMSQTsnp 415,ACGTTGGATGCTTTCTGAGCAGCCACCAAG,ACGTTGGATGTCGAAACTTGTCTACGTGAC,113,90.5,76.3,50.2,42.1,h,F,7002.6,taaaACAAGCAACGTCAAACCTA,A,7273.8,taaaACAAGCAACGTCAAACCTAA,G,7289.8,taaaACAAGCAACGTCAAACCTAG,NA,NA,NA,NA,NA,NA
3-18980171,CHR3,18980664,W1,iPLEX,AtMSQTsnp 232,ACGTTGGATGTGGTCGCATCTGTGAATGTC,ACGTTGGATGACAGCCGGATGTGGAACAAG,100,98.6,76.3,48.2,47.4,d,R,7201.7,cccaaCACATCCGTATTCGAATCC,C,7488.9,cccaaCACATCCGTATTCGAATCCG,A,7528.8,cccaaCACATCCGTATTCGAATCCT,NA,NA,NA,NA,NA,NA
5-1496987,CHR5,1497133,W1,iPLEX,AtMSQTsnp 327,ACGTTGGATGGATTAGTCTACCACCACAGC,ACGTTGGATGGATGCTTTCTTTCTTGTTCC,111,93.9,76.3,47.1,30.4,,R,7355.8,cCTCTGATGAAACAAAAGAAAAAC,G,7603,cCTCTGATGAAACAAAAGAAAAACC,T,7627.1,cCTCTGATGAAACAAAAGAAAAACA,NA,NA,NA,NA,NA,NA
5-625179,CHR5,625679,W1,iPLEX,AtMSQTsnp 321,ACGTTGGATGCAGACAACATCTTCCCCAAG,ACGTTGGATGTTAGTGTGCCTGGCAGATTC,102,100,76.3,49.5,36.4,d,F,7411.9,caAAGTTAAAGAGTAAGACACCGA,C,7659.1,caAAGTTAAAGAGTAAGACACCGAC,A,7683.1,caAAGTTAAAGAGTAAGACACCGAA,NA,NA,NA,NA,NA,NA
1-11655171,CHR1,11655519,W1,iPLEX,AtMSQTsnp 57,ACGTTGGATGGGCTCGGAGAAAACTTGTTG,ACGTTGGATGCGATCTCTGTTTCGTGATGG,101,100,76.3,53.7,50,d,R,7457.9,ggagTGTTGAGCAAGTAACGCGTC,T,7729.1,ggagTGTTGAGCAAGTAACGCGTCA,C,7745.1,ggagTGTTGAGCAAGTAACGCGTCG,NA,NA,NA,NA,NA,NA
2-6499196,CHR2,6499679,W1,iPLEX,AtMSQTsnp 130,ACGTTGGATGATGAGCTTCTGTGGCATACG,ACGTTGGATGGATAGGACTTGGGAATCTTG,111,98.1,76.3,53.8,50,D,F,7564.9,cctccGTGGCATACGAAAACCCCAA,C,7812.1,cctccGTGGCATACGAAAACCCCAAC,T,7892,cctccGTGGCATACGAAAACCCCAAT,NA,NA,NA,NA,NA,NA
1-23394478,CHR1,23395010,W1,iPLEX,AtMSQTsnp 88,ACGTTGGATGTTACACGAGCTCGGATACAC,ACGTTGGATGGACTCAGATTGATTGCACGC,95,99.9,76.3,49.5,32,,F,7571,TACACAACTACAGAATCTACACATA,A,7842.2,TACACAACTACAGAATCTACACATAA,G,7858.2,TACACAACTACAGAATCTACACATAG,NA,NA,NA,NA,NA,NA
2-7072571,CHR2,7072955,W1,iPLEX,AtMSQTsnp 132,ACGTTGGATGGATGGTCCAATGTTACCC,ACGTTGGATGTAAACTCTGGAAGCCAACGG,90,91.8,76.3,48.2,33.3,d,R,7778.1,ggatAAAAGGTTCAGATGAGTTCAA,T,8049.3,ggatAAAAGGTTCAGATGAGTTCAAA,C,8065.3,ggatAAAAGGTTCAGATGAGTTCAAG,NA,NA,NA,NA,NA,NA
1-2844111,CHR1,2844525,W1,iPLEX,AtMSQTsnp 15,ACGTTGGATGTGGCCTTTCAGAACCTACAG,ACGTTGGATGCTAGTCGTACCACTTGATTG,112,98,76.3,48.3,23.1,d,R,7932.2,AACCCAATAAAATCTTAACGAAAATA,T,8203.4,AACCCAATAAAATCTTAACGAAAATAA,C,8219.4,AACCCAATAAAATCTTAACGAAAATAG,NA,NA,NA,NA,NA,NA
4-11984495,CHR4,11984772,W1,iPLEX,AtMSQTsnp 288,ACGTTGGATGCGTGTGATGATAATCGGTGG,ACGTTGGATGGGAGGAGATCATCAGATGAC,106,99.9,76.3,58.7,56.5,Dh,R,8006.2,ttgGGTTTGTTCTTGGATCCCGCTGG,G,8253.4,ttgGGTTTGTTCTTGGATCCCGCTGGC,A,8333.3,ttgGGTTTGTTCTTGGATCCCGCTGGT,NA,NA,NA,NA,NA,NA
1-112445,CHR1,112907,W1,iPLEX,AtMSQTsnp 2,ACGTTGGATGTTACACCCAACAGCCAAAAC,ACGTTGGATGATTCTTTGGGCCTGGATCTC,109,98.2,76.3,47.4,28.6,D,R,8129.3,gggagTTTGTGAGTTATGTGCAAAAA,G,8376.5,gggagTTTGTGAGTTATGTGCAAAAAC,A,8456.4,gggagTTTGTGAGTTATGTGCAAAAAT,NA,NA,NA,NA,NA,NA
1-30213917,CHR1,30214313,W1,iPLEX,AtMSQTsnp 114,ACGTTGGATGGCTGGCTGATTGTAGATAAC,ACGTTGGATGCCCGCTTATTACTACATTC,107,92.7,76.3,47.7,34.8,D,R,8166.3,catgGAGTTTCTCATTTCCTTAATTCC,G,8413.5,catgGAGTTTCTCATTTCCTTAATTCCC,A,8493.4,catgGAGTTTCTCATTTCCTTAATTCCT,NA,NA,NA,NA,NA,NA
3-18590590,CHR3,18590671,W1,iPLEX,AtMSQTsnp 231,ACGTTGGATGGGATGATCTATCTTTAACAC,ACGTTGGATGGTTTCCAGTAGAGGATTTTG,114,82.2,76.3,48,22.2,,R,8285.5,GCATCAAAATATGAAAATAACCATAAA,G,8532.7,GCATCAAAATATGAAAATAACCATAAAC,A,8612.6,GCATCAAAATATGAAAATAACCATAAAT,NA,NA,NA,NA,NA,NA
5-19315950,CHR5,19316200,W1,iPLEX,AtMSQTsnp 388,ACGTTGGATGCACAAGTAAACAAATTGAGAC,ACGTTGGATGGAGCTACTAGATTTCCCAAG,113,81.9,76.3,47.4,25,,F,8572.6,taccAATTGAGACAACTTTCTAGAAAAA,C,8819.8,taccAATTGAGACAACTTTCTAGAAAAAC,A,8843.8,taccAATTGAGACAACTTTCTAGAAAAAA,NA,NA,NA,NA,NA,NA
4-16741855,CHR4,16742071,W1,iPLEX,AtMSQTsnp 306,ACGTTGGATGGCTCATCAATTCCCACTAAC,ACGTTGGATGGCGTCAATCAAATTCGTAA,118,83.4,76.3,47.1,25,,F,8655.7,gagcATCAGACATGAAAAATAATCAGAA,C,8902.9,gagcATCAGACATGAAAAATAATCAGAAC,G,8942.9,gagcATCAGACATGAAAAATAATCAGAAG,NA,NA,NA,NA,NA,NA
4-16272270,CHR4,16272521,W1,iPLEX,AtMSQTsnp 304,ACGTTGGATGTAAACTGACCTTCTCACCTC,ACGTTGGATGGGAGTTGCGAGATTGATGAG,104,98.5,76.3,57.3,48,,R,8707.7,aatcAACTGACCTTCTCACCTCTCTCGAT,T,8978.9,aatcAACTGACCTTCTCACCTCTCTCGATA,C,8994.9,aatcAACTGACCTTCTCACCTCTCTCGATG,NA,NA,NA,NA,NA,NA
5-22116605,CHR5,22116788,W2,iPLEX,AtMSQTsnp 398,ACGTTGGATGTCACCACTCCTCATCTACTC,ACGTTGGATGTGCGACTCCGATTTTACGAC,99,100,72.1,47.4,64.3,D,R,4146.7,CCAACACCAACCGC,G,4393.9,CCAACACCAACCGCC,C,4433.9,CCAACACCAACCGCG,NA,NA,NA,NA,NA,NA
1-4395913,CHR1,4396087,W2,iPLEX,AtMSQTsnp 22,ACGTTGGATGCGCTCCAATTCATTGCGTAG,ACGTTGGATGAAGATGGTTCCGATGAGCAG,104,99.9,72.1,45.4,57.1,D,F,4285.8,GGCGCTTCGTATGT,A,4557,GGCGCTTCGTATGTA,G,4573,GGCGCTTCGTATGTG,NA,NA,NA,NA,NA,NA
5-1213621,CHR5,1214057,W2,iPLEX,AtMSQTsnp 325,ACGTTGGATGTTTTCGTCGTTTCTTCTCCG,ACGTTGGATGATCGGATTGCGATTGTGGTG,113,97.9,72.1,45.7,53.3,D,R,4518.9,TTCTCCGGACATTGC,T,4790.2,TTCTCCGGACATTGCA,C,4806.2,TTCTCCGGACATTGCG,NA,NA,NA,NA,NA,NA
3-3679103,CHR3,3679541,W2,iPLEX,AtMSQTsnp 194,ACGTTGGATGTCTTGGAGGATGAAGCGTGG,ACGTTGGATGCGTCCTCTTCATCATCTTCC,101,98.6,72.1,45.2,50,D,F,4623,tAAGCGTGGCTTTGA,A,4894.2,tAAGCGTGGCTTTGAA,T,4950.1,tAAGCGTGGCTTTGAT,NA,NA,NA,NA,NA,NA
4-9377549,CHR4,9377790,W2,iPLEX,AtMSQTsnp 278,ACGTTGGATGTACTTTGGACAGGCTGAGAG,ACGTTGGATGCCGGAATGCTCATTAACCAG,109,99.7,72.1,45.7,60,dg,F,4713.1,GAGAGACGGGGTTTG,A,4984.3,GAGAGACGGGGTTTGA,G,5000.3,GAGAGACGGGGTTTGG,NA,NA,NA,NA,NA,NA
1-24893448,CHR1,24893649,W2,iPLEX,AtMSQTsnp 97,ACGTTGGATGAGACCATACACCACGTATGA,ACGTTGGATGGGGACCTTTTTCCGGTTTTC,98,96,72.1,45.2,50,D,R,4859.2,CCACGTATGACCAAGA,G,5106.4,CCACGTATGACCAAGAC,C,5146.4,CCACGTATGACCAAGAG,NA,NA,NA,NA,NA,NA
4-1055093,CHR4,1055234,W2,iPLEX,AtMSQTsnp 249,ACGTTGGATGCTCAACTAGTCCTTTCACAG,ACGTTGGATGCAGTCTGTTGTTCATGCACC,98,98.5,72.1,47.2,60,D,R,5042.3,ccCACAGCTTTCCGCTC,G,5289.5,ccCACAGCTTTCCGCTCC,A,5369.4,ccCACAGCTTTCCGCTCT,NA,NA,NA,NA,NA,NA
1-10423483,CHR1,10423708,W2,iPLEX,AtMSQTsnp 53,ACGTTGGATGATCCTGTCACTAACGGAACC,ACGTTGGATGAGGCGTCCGTGCATGTTAAG,105,98.5,72.1,45.9,47.1,sD,R,5212.4,ACAAGACGAATAGGCTC,T,5483.6,ACAAGACGAATAGGCTCA,C,5499.6,ACAAGACGAATAGGCTCG,NA,NA,NA,NA,NA,NA
4-13576336,CHR4,13576588,W2,iPLEX,AtMSQTsnp 294,ACGTTGGATGGCCAATCATCTATGATGAGG,ACGTTGGATGTGGTTCTGATCGCCTCAATC,103,98.5,72.1,45.5,47.1,D,R,5336.5,GGATGGTTTGTGGAATG,G,5583.7,GGATGGTTTGTGGAATGC,T,5607.7,GGATGGTTTGTGGAATGA,NA,NA,NA,NA,NA,NA
4-12403706,CHR4,12404111,W2,iPLEX,AtMSQTsnp 292,ACGTTGGATGGAATCCATATTGGAAAACTC,ACGTTGGATGGGAATTCATTCTCGGAGAAC,111,86.1,72.1,45.3,33.3,D,F,5412.5,TTTTTCTCTTTGGCCATT,C,5659.7,TTTTTCTCTTTGGCCATTC,T,5739.6,TTTTTCTCTTTGGCCATTT,NA,NA,NA,NA,NA,NA
1-1601885,CHR1,1602136,W2,iPLEX,AtMSQTsnp 11,ACGTTGGATGACTAGCAGAGAGATTGCACG,ACGTTGGATGGATAGAGCCTATTGTCTGGG,100,100,72.1,49.4,44.4,D,F,5449.6,AAACCTCCTTGGATTGCT,C,5696.7,AAACCTCCTTGGATTGCTC,T,5776.7,AAACCTCCTTGGATTGCTT,NA,NA,NA,NA,NA,NA
1-9496666,CHR1,9497118,W2,iPLEX,AtMSQTsnp 48,ACGTTGGATGCTCGACATTGGTCATAGGAA,ACGTTGGATGGACCTTGAACGACCTAGCAG,104,94.6,72.1,45.1,36.8,d,F,5817.8,TTGGTCATAGGAACTTCTA,C,6065,TTGGTCATAGGAACTTCTAC,T,6144.9,TTGGTCATAGGAACTTCTAT,NA,NA,NA,NA,NA,NA
5-872097,CHR5,872350,W2,iPLEX,AtMSQTsnp 323,ACGTTGGATGTTGGCCCGCTTTGTTCAATC,ACGTTGGATGATCCGTCTAACCAACTCAGC,104,99.9,72.1,46.9,38.9,D,F,5826.8,aAAATCGAATTCGGGTTCT,A,6098,aAAATCGAATTCGGGTTCTA,G,6114,aAAATCGAATTCGGGTTCTG,NA,NA,NA,NA,NA,NA
1-340398,CHR1,340810,W2,iPLEX,AtMSQTsnp 4,ACGTTGGATGTGAACACTAGCCCTAGCTTC,ACGTTGGATGACGTGGAGAAAGAGATCAGC,104,99.9,72.1,48.5,42.1,d,F,5995.9,aAGCCTCCATCAACTTCTTA,C,6243.1,aAGCCTCCATCAACTTCTTAC,A,6267.1,aAGCCTCCATCAACTTCTTAA,NA,NA,NA,NA,NA,NA
3-15879997,CHR3,15880426,W2,iPLEX,AtMSQTsnp 222,ACGTTGGATGTATCGGCATTCCTTCATCGC,ACGTTGGATGCTCTGATTGAAACATGATCAC,100,90.1,72.1,45.9,41.2,d,F,6024.9,tccTCGCTTATTGCCTTGTA,G,6312.1,tccTCGCTTATTGCCTTGTAG,T,6352,tccTCGCTTATTGCCTTGTAT,NA,NA,NA,NA,NA,NA
5-7278798,CHR5,7279057,W2,iPLEX,AtMSQTsnp 358,ACGTTGGATGGGTCCAGCTCTATCTTGTTC,ACGTTGGATGGAGTAATTACATGCAGCCA,116,90.9,72.1,47.7,40,,R,6205.1,AAGATTGATTAAGAGGCCTG,G,6452.2,AAGATTGATTAAGAGGCCTGC,A,6532.2,AAGATTGATTAAGAGGCCTGT,NA,NA,NA,NA,NA,NA
5-5318924,CHR5,5319138,W2,iPLEX,AtMSQTsnp 351,ACGTTGGATGCCGGCTCATTTTGTGTGTTG,ACGTTGGATGTCAGCAGTTACTCCTGTGG,90,98.1,72.1,46.7,30,D,R,6408.2,cTTGTGTGTTGACATTTTCAT,G,6655.4,cTTGTGTGTTGACATTTTCATC,A,6735.3,cTTGTGTGTTGACATTTTCATT,NA,NA,NA,NA,NA,NA
1-28666569,CHR1,28666837,W2,iPLEX,AtMSQTsnp 108,ACGTTGGATGTGTGCAAAAACTAGGTGAGG,ACGTTGGATGGTCTCCATTTTCCTCAAACG,113,96.5,72.1,47,36.8,D,F,6495.2,ctTGAGGTTTTGGTTTTGTTG,A,6766.4,ctTGAGGTTTTGGTTTTGTTGA,G,6782.4,ctTGAGGTTTTGGTTTTGTTGG,NA,NA,NA,NA,NA,NA
4-10659034,CHR4,10659455,W2,iPLEX,AtMSQTsnp 282,ACGTTGGATGCACCAAATTACCCCTTCATC,ACGTTGGATGAAGAATGCTACGGCAATGA,99,90.5,72.1,46.8,42.1,D,F,6580.3,gaaCCCTTCATCATCTTCTTCA,A,6851.5,gaaCCCTTCATCATCTTCTTCAA,T,6907.4,gaaCCCTTCATCATCTTCTTCAT,NA,NA,NA,NA,NA,NA
1-26794732,CHR1,26794838,W2,iPLEX,AtMSQTsnp 104,ACGTTGGATGTATGGTCAAGGCTTCATCAG,ACGTTGGATGCAAAGGCAGAGCAGTTAGAG,117,97.4,72.1,51.8,47.6,D,F,6701.4,cGGAGTCTGTCAGCATTTTCAC,C,6948.5,cGGAGTCTGTCAGCATTTTCACC,T,7028.5,cGGAGTCTGTCAGCATTTTCACT,NA,NA,NA,NA,NA,NA
5-22414510,CHR5,22414941,W2,iPLEX,AtMSQTsnp 399,ACGTTGGATGCGACGTGTAATAGACGGAAG,ACGTTGGATGAGCGAAAATGGAGCTCTGTG,101,100,72.1,52.1,40.9,d,R,6816.5,ACGGAAGAAACGGATTAATTGC,G,7063.7,ACGGAAGAAACGGATTAATTGCC,A,7143.6,ACGGAAGAAACGGATTAATTGCT,NA,NA,NA,NA,NA,NA
5-20214933,CHR5,20215473,W2,iPLEX,AtMSQTsnp 390,ACGTTGGATGATGACACTTTTAACCAAGA,ACGTTGGATGAGCAAGGCCGAGTTAAATCC,108,77.3,72.1,47.1,31.8,DH,R,6981.6,tACACTTTTAACCAAGATTGTAC,T,7252.8,tACACTTTTAACCAAGATTGTACA,C,7268.8,tACACTTTTAACCAAGATTGTACG,NA,NA,NA,NA,NA,NA
3-9747158,CHR3,9747261,W2,iPLEX,AtMSQTsnp 214,ACGTTGGATGGTGAAGTATGGGTATTCGGG,ACGTTGGATGTCTTCTCGCATCACTCATC,110,97.5,72.1,49.2,34.8,,R,7099.6,GAGACTTCGATTGTTGATGTTTA,G,7346.8,GAGACTTCGATTGTTGATGTTTAC,A,7426.7,GAGACTTCGATTGTTGATGTTTAT,NA,NA,NA,NA,NA,NA
5-6707732,CHR5,6708014,W2,iPLEX,AtMSQTsnp 355,ACGTTGGATGAAGGCTTCGAGACTAACAGG,ACGTTGGATGCGTCTTCTCATCTTTGCTTG,116,97.6,72.1,52.8,41.7,,R,7302.8,CAGGCTCTGTCAATATCCATGTTA,G,7549.9,CAGGCTCTGTCAATATCCATGTTAC,T,7574,CAGGCTCTGTCAATATCCATGTTAA,NA,NA,NA,NA,NA,NA
1-5481722,CHR1,5482008,W2,iPLEX,AtMSQTsnp 29,ACGTTGGATGGTACAGATTCATAACCAGACG,ACGTTGGATGCCCCTTAAGTATCCTTAACC,120,91.7,72.1,51.8,39.1,D,R,7378.8,gAGATTCATAACCAGACGAGACAT,T,7650,gAGATTCATAACCAGACGAGACATA,A,7705.9,gAGATTCATAACCAGACGAGACATT,NA,NA,NA,NA,NA,NA
5-20915132,CHR5,20915321,W2,iPLEX,AtMSQTsnp 395,ACGTTGGATGGGTAGTCGGTAAGTTTTGGG,ACGTTGGATGAGGACATATAAACCTCGGTG,115,97.7,72.1,45.5,31.8,,F,7491.9,ggAAGAGACAAGAAGTAGTAAATC,A,7763.1,ggAAGAGACAAGAAGTAGTAAATCA,G,7779.1,ggAAGAGACAAGAAGTAGTAAATCG,NA,NA,NA,NA,NA,NA
1-1042028,CHR1,1042427,W2,iPLEX,AtMSQTsnp 9,ACGTTGGATGCTCTCTGTTACATATAACC,ACGTTGGATGCCCCTTTTTCGTGTCATATT,97,80.8,72.1,47.3,24,,F,7618,ATATAACCATTTGTTTGTTCTTTTG,G,7905.2,ATATAACCATTTGTTTGTTCTTTTGG,T,7945.1,ATATAACCATTTGTTTGTTCTTTTGT,NA,NA,NA,NA,NA,NA
4-9213072,CHR4,9213312,W2,iPLEX,AtMSQTsnp 274,ACGTTGGATGCTTGTGTGTATTCTAGAAC,ACGTTGGATGCTCTGTACATTAACTCCAAC,105,82.9,72.1,48.7,29.2,d,R,7815.1,gTTAGATGTGTTTGAAAAGTGTAGA,G,8062.3,gTTAGATGTGTTTGAAAAGTGTAGAC,T,8086.3,gTTAGATGTGTTTGAAAAGTGTAGAA,NA,NA,NA,NA,NA,NA
2-9428891,CHR2,9428987,W2,iPLEX,AtMSQTsnp 143,ACGTTGGATGGGTCAGTGTGCTCTCCCTAT,ACGTTGGATGCATCCATCCACTGTCCATCA,118,93.6,72.1,49.9,39.1,,R,7863.1,ccgCAGTGTGCTCTCCCTATTTATAT,C,8150.3,ccgCAGTGTGCTCTCCCTATTTATATG,A,8190.2,ccgCAGTGTGCTCTCCCTATTTATATT,NA,NA,NA,NA,NA,NA
4-5775541,CHR4,5775707,W2,iPLEX,AtMSQTsnp 260,ACGTTGGATGTGATCCGTGACTACAGAAGC,ACGTTGGATGGGAACGAGAATCGTATCGAG,108,99.7,72.1,52.6,36,D,F,7975.2,tAACTTTCTGATATCTGTGACGGAAT,C,8222.4,tAACTTTCTGATATCTGTGACGGAATC,A,8246.4,tAACTTTCTGATATCTGTGACGGAATA,NA,NA,NA,NA,NA,NA
3-16489217,CHR3,16489589,W2,iPLEX,AtMSQTsnp 223,ACGTTGGATGCTCTTTTGGAGAGTACTGAG,ACGTTGGATGTCATCCCCGGCATTCTTCAG,114,96.4,72.1,52.8,45.8,DH,F,8017.2,cgCTTTTGGAGAGTACTGAGGTTACC,A,8288.4,cgCTTTTGGAGAGTACTGAGGTTACCA,G,8304.4,cgCTTTTGGAGAGTACTGAGGTTACCG,NA,NA,NA,NA,NA,NA
1-2210982,CHR1,2211033,W2,iPLEX,AtMSQTsnp 12,ACGTTGGATGTGCCTATCAAAACAATCAG,ACGTTGGATGGTTTTATGTTATCGACGTTG,90,76.9,72.1,47.6,30.4,,R,8120.3,gggAAACTTGTGGGAATAGTTTATTG,G,8367.5,gggAAACTTGTGGGAATAGTTTATTGC,A,8447.4,gggAAACTTGTGGGAATAGTTTATTGT,NA,NA,NA,NA,NA,NA
2-16908054,CHR2,16908190,W2,iPLEX,AtMSQTsnp 173,ACGTTGGATGGAGTGATGATGACACCAAGG,ACGTTGGATGAGAGGAGATGTGTCTAAGGC,98,100,72.1,52.9,41.7,d,F,8412.5,aggGATGATGACACCAAGGAGTTTAGT,A,8683.7,aggGATGATGACACCAAGGAGTTTAGTA,G,8699.7,aggGATGATGACACCAAGGAGTTTAGTG,NA,NA,NA,NA,NA,NA
4-10482038,CHR4,10482088,W2,iPLEX,AtMSQTsnp 281,ACGTTGGATGTCTCATCACCACCGAAACTC,ACGTTGGATGGATTACATCTTCGACGGTGG,94,99.9,72.1,58.7,50,D,F,8495.5,acCCGAAACTCCGACCAGAAATGACTCT,C,8742.7,acCCGAAACTCCGACCAGAAATGACTCTC,T,8822.6,acCCGAAACTCCGACCAGAAATGACTCTT,NA,NA,NA,NA,NA,NA
4-17803605,CHR4,17803781,W2,iPLEX,AtMSQTsnp 312,ACGTTGGATGTCTGGCTTGTGATGCCTTTG,ACGTTGGATGTGGTACATGGTTTGTGCCAG,89,99.5,72.1,60.6,53.8,D,R,8504.5,ccGCTTGTGATGCCTTTGGTGTTCTCCC,T,8775.7,ccGCTTGTGATGCCTTTGGTGTTCTCCCA,C,8791.7,ccGCTTGTGATGCCTTTGGTGTTCTCCCG,NA,NA,NA,NA,NA,NA
1-13395451,CHR1,13395892,W2,iPLEX,AtMSQTsnp 61,ACGTTGGATGTTATATGTTACATATGTATC,ACGTTGGATGGTGGCTTAGCTCTTATGTGG,108,59.2,72.1,45.1,23.1,D,F,8606.6,ttTTATATGTTACATATGTATCAATGAG,C,8853.8,ttTTATATGTTACATATGTATCAATGAGC,T,8933.7,ttTTATATGTTACATATGTATCAATGAGT,NA,NA,NA,NA,NA,NA
2-10702850,CHR2,10703371,W2,iPLEX,AtMSQTsnp 146,ACGTTGGATGCTCTTGCATTTCAAATCTCTC,ACGTTGGATGCTCTATCTATCATTTCACC,120,78,72.1,47.6,18.5,,R,8650.6,gGTGAATTTTATTTGTGAATGTTTTTTT,G,8897.8,gGTGAATTTTATTTGTGAATGTTTTTTTC,A,8977.7,gGTGAATTTTATTTGTGAATGTTTTTTTT,NA,NA,NA,NA,NA,NA
5-15568698,CHR5,15569205,W3,iPLEX,AtMSQTsnp 372,ACGTTGGATGGATCAAATATATACGCAGC,ACGTTGGATGATCATAGTGTTATTACTTTC,119,57.6,71.8,46.3,57.1,Dh,R,4183.7,TACGCAGCTCCACT,G,4430.9,TACGCAGCTCCACTC,A,4510.8,TACGCAGCTCCACTT,NA,NA,NA,NA,NA,NA
3-5235221,CHR3,5235571,W3,iPLEX,AtMSQTsnp 198,ACGTTGGATGGGTCTATGACTATGAGGCAG,ACGTTGGATGCGAGTCGTTGCATGAGATTG,101,100,71.8,50.2,71.4,dh,R,4313.8,GATGAACCGGCGGC,T,4585,GATGAACCGGCGGCA,C,4601,GATGAACCGGCGGCG,NA,NA,NA,NA,NA,NA
5-15767914,CHR5,15767945,W3,iPLEX,AtMSQTsnp 373,ACGTTGGATGTTCACAGTGAGAACTGCGTG,ACGTTGGATGTAAAGTTAAACCCATCAGC,80,86.5,71.8,45,53.3,d,R,4550,CTGCGTGACGTTTTC,G,4797.1,CTGCGTGACGTTTTCC,A,4877.1,CTGCGTGACGTTTTCT,NA,NA,NA,NA,NA,NA
1-5922974,CHR1,5923041,W3,iPLEX,AtMSQTsnp 31,ACGTTGGATGCCTTTATTCTCGCCTTTTTGG,ACGTTGGATGAATCCAAAACACAGAACAC,81,81.9,71.8,45.8,46.7,D,F,4636,TGGGTTGCTGTTTGT,G,4923.2,TGGGTTGCTGTTTGTG,T,4963.1,TGGGTTGCTGTTTGTT,NA,NA,NA,NA,NA,NA
4-8078388,CHR4,8078648,W3,iPLEX,AtMSQTsnp 266,ACGTTGGATGTCATCATTCAAAAACTCCC,ACGTTGGATGTAACGGTGTGAATGTTGTTG,102,83,71.8,45.1,50,d,F,4730.1,AAAACTCCCACCTCTC,G,5017.3,AAAACTCCCACCTCTCG,T,5057.2,AAAACTCCCACCTCTCT,NA,NA,NA,NA,NA,NA
3-2072648,CHR3,2072780,W3,iPLEX,AtMSQTsnp 188,ACGTTGGATGGGGATTTTATCCAATCTCCT,ACGTTGGATGTCACTGGAATCTTTGGAGGG,102,92,71.8,45.5,41.2,D,R,5102.3,TCCAATCTCCTTTTGGT,T,5373.5,TCCAATCTCCTTTTGGTA,C,5389.5,TCCAATCTCCTTTTGGTG,NA,NA,NA,NA,NA,NA
4-7077771,CHR4,7077926,W3,iPLEX,AtMSQTsnp 263,ACGTTGGATGATCCCGATTACTCGAATTTG,ACGTTGGATGTAACTACCACGTATCTCCGC,114,93.6,71.8,45.1,41.2,D,R,5191.4,ATTTGATCGAGCGTTTC,T,5462.6,ATTTGATCGAGCGTTTCA,C,5478.6,ATTTGATCGAGCGTTTCG,NA,NA,NA,NA,NA,NA
5-26029366,CHR5,26029439,W3,iPLEX,AtMSQTsnp 409,ACGTTGGATGACAATTCCCGATGATCATCC,ACGTTGGATGCTTTTTCAATTCCCGACCCG,88,98,71.8,47,56.3,D,F,5266.4,gTGGAGATCTCGATCGG,C,5513.6,gTGGAGATCTCGATCGGC,T,5593.5,gTGGAGATCTCGATCGGT,NA,NA,NA,NA,NA,NA
5-22040690,CHR5,22040877,W3,iPLEX,AtMSQTsnp 397,ACGTTGGATGTCGAGTCCACTTTCATCCTC,ACGTTGGATGTAGGCCACATTTCAAAGACC,99,98.6,71.8,45.3,50,S,F,5339.5,ccTCATCCTCAAAGCTCC,G,5626.7,ccTCATCCTCAAAGCTCCG,T,5666.6,ccTCATCCTCAAAGCTCCT,NA,NA,NA,NA,NA,NA
2-5020871,CHR2,5021020,W3,iPLEX,AtMSQTsnp 128,ACGTTGGATGGAGGTTTGAAAACACGAGAAC,ACGTTGGATGATTTTGTGATAATGATTTGC,99,65.8,71.8,45.3,38.9,D,F,5424.5,AACTCACATTTTCTTCGG,G,5711.8,AACTCACATTTTCTTCGGG,T,5751.6,AACTCACATTTTCTTCGGT,NA,NA,NA,NA,NA,NA
5-3606683,CHR5,3606967,W3,iPLEX,AtMSQTsnp 343,ACGTTGGATGGAATTTGAAATTGCTTGGTCG,ACGTTGGATGGAACGTATCTGCAGAAACC,101,88.2,71.8,48.6,47.1,D,F,5558.6,gGCTTGGTCGTTGGTTTT,C,5805.8,gGCTTGGTCGTTGGTTTTC,T,5885.7,gGCTTGGTCGTTGGTTTTT,NA,NA,NA,NA,NA,NA
2-17859576,CHR2,17859964,W3,iPLEX,AtMSQTsnp 177,ACGTTGGATGGAATGCTTGAGGGAGCAGAG,ACGTTGGATGACTGTCAGGCATGGTTTTCC,111,98.1,71.8,45.8,41.2,D,R,5836.8,ggTTTCCAAGCAATGAAGC,G,6084,ggTTTCCAAGCAATGAAGCC,A,6163.9,ggTTTCCAAGCAATGAAGCT,NA,NA,NA,NA,NA,NA
5-20518241,CHR5,20518330,W3,iPLEX,AtMSQTsnp 394,ACGTTGGATGTTGTCTAGAAACCGACCTCC,ACGTTGGATGCTAGACAGCCGGCTAGTAAT,112,96.9,71.8,45.5,50,D,F,5843.8,ggaGAATTGTTGCTCACCG,A,6115,ggaGAATTGTTGCTCACCGA,G,6131,ggaGAATTGTTGCTCACCGG,NA,NA,NA,NA,NA,NA
4-11325921,CHR4,11326190,W3,iPLEX,AtMSQTsnp 285,ACGTTGGATGAGGGCTTATAAGCATTCCAC,ACGTTGGATGTTAAAGTTCCCGGCGATGTC,101,98.6,71.8,52.6,50,D,R,5965.9,AGCATTCCACCTCCAATACC,T,6237.1,AGCATTCCACCTCCAATACCA,C,6253.1,AGCATTCCACCTCCAATACCG,NA,NA,NA,NA,NA,NA
5-25301036,CHR5,25301234,W3,iPLEX,AtMSQTsnp 408,ACGTTGGATGGAACGAGTTGCAGCTTTTGG,ACGTTGGATGCTTGCCAACCTCTGGTTGC,119,94.6,71.8,50.4,45,D,R,6042.9,ACCATAACTCTTGGTCTTGC,G,6290.1,ACCATAACTCTTGGTCTTGCC,A,6370,ACCATAACTCTTGGTCTTGCT,NA,NA,NA,NA,NA,NA
2-2477306,CHR2,2477756,W3,iPLEX,AtMSQTsnp 126,ACGTTGGATGGTTAGTATCAAAATAATTAG,ACGTTGGATGCACACCTTAGAGACATGGG,120,57.5,71.8,45.8,35,d,R,6198.1,ATCAAAATAATTAGGGCAGG,G,6445.3,ATCAAAATAATTAGGGCAGGC,A,6525.2,ATCAAAATAATTAGGGCAGGT,NA,NA,NA,NA,NA,NA
1-21908330,CHR1,21908667,W3,iPLEX,AtMSQTsnp 76,ACGTTGGATGTACCACTCATGGGAGCATAC,ACGTTGGATGGAAAACTCTATCTTCATCTC,110,87.4,71.8,53.5,50,D,R,6206.1,ATGGGAGCATACATCGGGTA,T,6477.3,ATGGGAGCATACATCGGGTAA,C,6493.3,ATGGGAGCATACATCGGGTAG,NA,NA,NA,NA,NA,NA
1-9781260,CHR1,9781347,W3,iPLEX,AtMSQTsnp 49,ACGTTGGATGCTTTCAGAAGTTGTATGTGG,ACGTTGGATGCGTTTAGGTGGGATATATAC,116,88.1,71.8,48.3,42.1,d,R,6328.1,ccCACATATGCGAACACTCAA,T,6599.4,ccCACATATGCGAACACTCAAA,C,6615.4,ccCACATATGCGAACACTCAAG,NA,NA,NA,NA,NA,NA
4-15764920,CHR4,15765120,W3,iPLEX,AtMSQTsnp 300,ACGTTGGATGGTGACGACGATTTGCGTTTG,ACGTTGGATGAGGAAACCAATTCTCGACGG,113,99.3,71.8,48.9,42.1,Sd,R,6414.2,tcATCCGCGTTTAAAAAGGAC,G,6661.4,tcATCCGCGTTTAAAAAGGACC,A,6741.3,tcATCCGCGTTTAAAAAGGACT,NA,NA,NA,NA,NA,NA
3-2236406,CHR3,2236458,W3,iPLEX,AtMSQTsnp 191,ACGTTGGATGCCAGGACTTGTTTTGACAGG,ACGTTGGATGAGCTGAGGAAGAGGAAGAAG,119,98.6,71.8,47.6,44.4,,R,6563.3,ctcgACGTCCATCTTCTTCTCT,C,6850.5,ctcgACGTCCATCTTCTTCTCTG,A,6890.4,ctcgACGTCCATCTTCTTCTCTT,NA,NA,NA,NA,NA,NA
2-322253,CHR2,322335,W3,iPLEX,AtMSQTsnp 118,ACGTTGGATGCATGAATAGTGATCTCTATC,ACGTTGGATGTGCTTGGATGGTCAAACCTG,101,87.8,71.8,45.7,31.8,DH,F,6699.4,ATAGTGATCTCTATCTTCTGAA,A,6970.6,ATAGTGATCTCTATCTTCTGAAA,G,6986.6,ATAGTGATCTCTATCTTCTGAAG,NA,NA,NA,NA,NA,NA
4-18560103,CHR4,18560343,W3,iPLEX,AtMSQTsnp 315,ACGTTGGATGAGGCACAAAAGGTCTCAAAG,ACGTTGGATGGCAGATGGATTTGACTACTC,117,96,71.8,45.8,38.9,d,F,6799.4,gggcAGGTCTCAAAGTTAGCAT,A,7070.6,gggcAGGTCTCAAAGTTAGCATA,T,7126.5,gggcAGGTCTCAAAGTTAGCATT,NA,NA,NA,NA,NA,NA
2-8749828,CHR2,8750047,W3,iPLEX,AtMSQTsnp 140,ACGTTGGATGGGGTGGAGACAACTTCTCAG,ACGTTGGATGGCAGTCTTTCTTTCATTAT,120,75.1,71.8,47.2,42.1,D,F,6936.5,cgatACAACTTCTCAGACTCAAC,C,7183.7,cgatACAACTTCTCAGACTCAACC,A,7207.7,cgatACAACTTCTCAGACTCAACA,NA,NA,NA,NA,NA,NA
5-7442039,CHR5,7442381,W3,iPLEX,AtMSQTsnp 359,ACGTTGGATGCTTGGAACCTGGTTTCTGAC,ACGTTGGATGGCGACGGCGAAATGATATAC,98,100,71.8,49.2,40.9,D,F,7029.6,gCTGGTTTCTGACCTTATCAAAG,G,7316.8,gCTGGTTTCTGACCTTATCAAAGG,T,7356.7,gCTGGTTTCTGACCTTATCAAAGT,NA,NA,NA,NA,NA,NA
1-18340113,CHR1,18340160,W3,iPLEX,AtMSQTsnp 69,ACGTTGGATGCACAACTCCATCAGAAGAAG,ACGTTGGATGGGTGTAACTTGTATCACCGC,98,98.5,71.8,51.1,45,H,F,7281.8,ctccGCTGAAGCAAACATTGCATC,G,7569,ctccGCTGAAGCAAACATTGCATCG,T,7608.8,ctccGCTGAAGCAAACATTGCATCT,NA,NA,NA,NA,NA,NA
3-4818362,CHR3,4818602,W3,iPLEX,AtMSQTsnp 197,ACGTTGGATGACAGAGACGCGTCTGTGTTC,ACGTTGGATGCCCGAGTTAGTTATCAGTTG,90,96.8,71.8,46.7,36.4,D,F,7422.8,ggCTGTGTTCTGGAGATTATAAAC,A,7694,ggCTGTGTTCTGGAGATTATAAACA,G,7710,ggCTGTGTTCTGGAGATTATAAACG,NA,NA,NA,NA,NA,NA
1-26278221,CHR1,26278413,W3,iPLEX,AtMSQTsnp 101,ACGTTGGATGTACAACCTGAAGTCTTTTCC,ACGTTGGATGTCAGTCATCATTGTTACCAG,105,89,71.8,47.1,25,,R,7513.9,cTTTTTACTCACTTGTTTCTCATTA,G,7761.1,cTTTTTACTCACTTGTTTCTCATTAC,A,7841,cTTTTTACTCACTTGTTTCTCATTAT,NA,NA,NA,NA,NA,NA
3-580026,CHR3,580470,W3,iPLEX,AtMSQTsnp 187,ACGTTGGATGTGTTCTTGTCTAGGCCTGAG,ACGTTGGATGGCTAACACAGCTACAGTCAG,117,98.9,71.8,54.1,43.5,d,F,7656,taACGCTGCAGGTCATAATTGATTC,A,7927.2,taACGCTGCAGGTCATAATTGATTCA,T,7983.1,taACGCTGCAGGTCATAATTGATTCT,NA,NA,NA,NA,NA,NA
3-21632379,CHR3,21632608,W3,iPLEX,AtMSQTsnp 242,ACGTTGGATGCAGCCTCTAGAATCTCTATG,ACGTTGGATGGAAACCATTGTGGAAAATAAG,116,81.7,71.8,45.1,36.4,d,R,7807.1,cccaCTCTAGAATCTCTATGTCTTTC,T,8078.3,cccaCTCTAGAATCTCTATGTCTTTCA,C,8094.3,cccaCTCTAGAATCTCTATGTCTTTCG,NA,NA,NA,NA,NA,NA
4-9579976,CHR4,9580049,W3,iPLEX,AtMSQTsnp 279,ACGTTGGATGTGACTCAATAAACCTCGCTG,ACGTTGGATGATAAATTCGGGTCAAGGTG,100,92.9,71.8,48.3,31.8,d,F,7892.2,cccgCAATAAACCTCGCTGAAAAATT,C,8139.4,cccgCAATAAACCTCGCTGAAAAATTC,T,8219.3,cccgCAATAAACCTCGCTGAAAAATTT,NA,NA,NA,NA,NA,NA
3-6890596,CHR3,6890665,W3,iPLEX,AtMSQTsnp 203,ACGTTGGATGGTGGTGGATGAATTATGGTC,ACGTTGGATGCACAATAAACATGGTTGCAC,110,92.6,71.8,50.8,32,,F,8024.2,cACAGGTTGCTGTTAAATTAGATAGT,A,8295.4,cACAGGTTGCTGTTAAATTAGATAGTA,T,8351.3,cACAGGTTGCTGTTAAATTAGATAGTT,NA,NA,NA,NA,NA,NA
1-7842440,CHR1,7842523,W3,iPLEX,AtMSQTsnp 40,ACGTTGGATGCTTGCAGGTTGAAACATCAC,ACGTTGGATGCTTTTGGAAAAATTGAGAGAG,108,82.3,71.8,50.4,39.1,D,R,8175.3,caaaATCACTTCTTCTTGGTTACTCTG,G,8422.5,caaaATCACTTCTTCTTGGTTACTCTGC,C,8462.5,caaaATCACTTCTTCTTGGTTACTCTGG,NA,NA,NA,NA,NA,NA
2-9256049,CHR2,9256095,W3,iPLEX,AtMSQTsnp 142,ACGTTGGATGCGTCTCAAGTTCGTTCTCTC,ACGTTGGATGCAGATCTGGAAATGCAAATG,95,94.3,71.8,48.4,29.6,,F,8263.4,CTCTCTTCAATGTGAATAGTATATAGT,C,8510.6,CTCTCTTCAATGTGAATAGTATATAGTC,T,8590.5,CTCTCTTCAATGTGAATAGTATATAGTT,NA,NA,NA,NA,NA,NA
5-2244524,CHR5,2244739,W3,iPLEX,AtMSQTsnp 334,ACGTTGGATGCTCCGGTTACGCTAGTAGTT,ACGTTGGATGCGGGAGAGAACTTAAACGAC,103,97.4,71.8,55.1,52.2,D,R,8386.4,ggaaGGTTACGCTAGTAGTTTCGTCGG,T,8657.6,ggaaGGTTACGCTAGTAGTTTCGTCGGA,C,8673.6,ggaaGGTTACGCTAGTAGTTTCGTCGGG,NA,NA,NA,NA,NA,NA
5-17171242,CHR5,17171676,W3,iPLEX,AtMSQTsnp 378,ACGTTGGATGGTCAGAAACAAGAGGTAGTA,ACGTTGGATGGAGGATTATAGATAAGTTTCG,119,75.9,71.8,48.8,29.2,dh,R,8548.6,caacACAACTGAATAAACTAGTTTGACT,G,8795.8,caacACAACTGAATAAACTAGTTTGACTC,C,8835.8,caacACAACTGAATAAACTAGTTTGACTG,NA,NA,NA,NA,NA,NA
5-15065018,CHR5,15065196,W3,iPLEX,AtMSQTsnp 370,ACGTTGGATGTTCTACATGAACATGGTGTG,ACGTTGGATGGACATGATCACCTCTAACTC,111,92.6,71.8,50.1,30.8,sD,R,8623.6,tcCATGAACATGGTGTGTTATTGTATAT,G,8870.8,tcCATGAACATGGTGTGTTATTGTATATC,A,8950.7,tcCATGAACATGGTGTGTTATTGTATATT,NA,NA,NA,NA,NA,NA
1-10719833,CHR1,10720273,W3,iPLEX,AtMSQTsnp 54,ACGTTGGATGAGAGCTTCCACAGAATTCGG,ACGTTGGATGTGGAGAATTCGTGGAATCCG,90,99.2,71.8,50,37.5,D,F,8710.7,gggcGAATTCGGATAAAGGATCGAAATC,A,8981.9,gggcGAATTCGGATAAAGGATCGAAATCA,G,8997.9,gggcGAATTCGGATAAAGGATCGAAATCG,NA,NA,NA,NA,NA,NA
1-4142402,CHR1,4142539,W4,iPLEX,AtMSQTsnp 21,ACGTTGGATGAAGTTCAACGCATTCGGGAC,ACGTTGGATGACTGGAGAGCTGTGAAAAGG,100,100,74,47.1,57.1,,R,4263.8,TTCGGGACTGCCAA,T,4535,TTCGGGACTGCCAAA,C,4551,TTCGGGACTGCCAAG,NA,NA,NA,NA,NA,NA
1-23381443,CHR1,23381760,W4,iPLEX,AtMSQTsnp 87,ACGTTGGATGCTCCGTTTCCTCCTCTGTTT,ACGTTGGATGGAAGCAGCTGAGTATATGTG,118,94.8,74,46.8,60,D,R,4485.9,CCTCTGTTTCGTCGC,T,4757.1,CCTCTGTTTCGTCGCA,C,4773.1,CCTCTGTTTCGTCGCG,NA,NA,NA,NA,NA,NA
1-7449482,CHR1,7449598,W4,iPLEX,AtMSQTsnp 38,ACGTTGGATGGGAGATTGAACACTTGCTCG,ACGTTGGATGGTCATAACTACGGCTACTGG,90,99.6,74,46.1,53.3,d,F,4599,GCTCGGTGTTCGAAT,C,4846.2,GCTCGGTGTTCGAATC,A,4870.2,GCTCGGTGTTCGAATA,NA,NA,NA,NA,NA,NA
5-17629093,CHR5,17629384,W4,iPLEX,AtMSQTsnp 379,ACGTTGGATGTCAAAGAATCGTAGCCGGAG,ACGTTGGATGACGAGAGCTAGGTCTCATAC,101,100,74,46.4,60,D,F,4682.1,GAGAAACCGTGGTGG,A,4953.3,GAGAAACCGTGGTGGA,G,4969.3,GAGAAACCGTGGTGGG,NA,NA,NA,NA,NA,NA
1-3872234,CHR1,3872591,W4,iPLEX,AtMSQTsnp 18,ACGTTGGATGCAGACTCTGAACTCGAGAAG,ACGTTGGATGGAGGTTTTCACCTTCTTAGC,102,98.5,74,45.7,50,D,R,4912.2,CGAATCCTGTGGATGT,G,5159.4,CGAATCCTGTGGATGTC,C,5199.4,CGAATCCTGTGGATGTG,NA,NA,NA,NA,NA,NA
3-2231413,CHR3,2231938,W4,iPLEX,AtMSQTsnp 189,ACGTTGGATGGCCTTTCAAGGAACAAGAGC,ACGTTGGATGGCTTCTTTCTTCTGTTCAA,101,85.7,74,54.4,66.7,,R,5098.3,ccACGTGCCCGTGCTCT,G,5345.5,ccACGTGCCCGTGCTCTC,A,5425.4,ccACGTGCCCGTGCTCTT,NA,NA,NA,NA,NA,NA
1-24292482,CHR1,24292774,W4,iPLEX,AtMSQTsnp 92,ACGTTGGATGGCTCGTGCTCGTAGTTATAT,ACGTTGGATGCAGACCAACAACATACATGC,118,93.5,74,45.8,41.2,D,F,5107.4,ACCAAAGCTTAACTCCA,A,5378.6,ACCAAAGCTTAACTCCAA,G,5394.6,ACCAAAGCTTAACTCCAG,NA,NA,NA,NA,NA,NA
1-8014943,CHR1,8015448,W4,iPLEX,AtMSQTsnp 41,ACGTTGGATGCTCTGCAACCATAGGATGTG,ACGTTGGATGGACAACGTTAATTCTCCCG,104,97.8,74,45.3,41.2,D,F,5258.4,ATAGGATGTGGCTCAAA,C,5505.6,ATAGGATGTGGCTCAAAC,T,5585.5,ATAGGATGTGGCTCAAAT,NA,NA,NA,NA,NA,NA
1-5206479,CHR1,5206767,W4,iPLEX,AtMSQTsnp 27,ACGTTGGATGTAGATTATGCCACTTGTCCG,ACGTTGGATGTGTCTCAGATTGCAGGAAAG,109,96.8,74,45,64.3,D,R,5298.4,gggCTTGTCCGGGATGG,G,5545.6,gggCTTGTCCGGGATGGC,A,5625.5,gggCTTGTCCGGGATGGT,NA,NA,NA,NA,NA,NA
2-18752604,CHR2,18752840,W4,iPLEX,AtMSQTsnp 184,ACGTTGGATGCATCTCGTGGTGCCTATTTG,ACGTTGGATGCGAGAAGAAGAGTGATAGTTG,94,94.4,74,49.2,50,sD,F,5465.6,TGGAACAGTCTTGCTCTC,A,5736.8,TGGAACAGTCTTGCTCTCA,T,5792.7,TGGAACAGTCTTGCTCTCT,NA,NA,NA,NA,NA,NA
1-17355484,CHR1,17355738,W4,iPLEX,AtMSQTsnp 67,ACGTTGGATGTCCTCCATGGTGATAACTCC,ACGTTGGATGTGTTCGTTCTGCATTTTGG,109,93.9,74,45.8,42.1,d,R,5691.7,TGATAACTCCTACAACCTC,G,5938.9,TGATAACTCCTACAACCTCC,A,6018.8,TGATAACTCCTACAACCTCT,NA,NA,NA,NA,NA,NA
2-10566416,CHR2,10566917,W4,iPLEX,AtMSQTsnp 145,ACGTTGGATGGAAAATTACCATTCTACCCTC,ACGTTGGATGAGATGACTTGCCGAGGTTTC,99,90.1,74,46.2,60,d,R,5699.7,tcagTCTACCCTCGTGACC,T,5970.9,tcagTCTACCCTCGTGACCA,C,5986.9,tcagTCTACCCTCGTGACCG,NA,NA,NA,NA,NA,NA
5-1931083,CHR5,1931167,W4,iPLEX,AtMSQTsnp 331,ACGTTGGATGACGAGGATGTGAATTCTCAG,ACGTTGGATGACCTCCACGACTTGATCAAC,110,98.2,74,45.5,42.1,d,R,5851.8,AGATCTATAGGATCGATGC,G,6099,AGATCTATAGGATCGATGCC,C,6139,AGATCTATAGGATCGATGCG,NA,NA,NA,NA,NA,NA
5-20408706,CHR5,20409250,W4,iPLEX,AtMSQTsnp 392,ACGTTGGATGAGGAGAAACAATCAGGCTTG,ACGTTGGATGGAGAAGAGTGGAATCGAAGG,99,93.5,74,50.4,50,h,R,6055,acCAATCAGGCTTGACCCAA,G,6302.1,acCAATCAGGCTTGACCCAAC,A,6382.1,acCAATCAGGCTTGACCCAAT,NA,NA,NA,NA,NA,NA
1-20174753,CHR1,20175347,W4,iPLEX,AtMSQTsnp 73,ACGTTGGATGGCCATCGAATGGAAAGTACG,ACGTTGGATGTCCTACGATACGGTGACATC,109,99.7,74,46.3,50,D,F,6207,ggggCAAGCTTCGTCAGGAA,C,6454.2,ggggCAAGCTTCGTCAGGAAC,T,6534.1,ggggCAAGCTTCGTCAGGAAT,NA,NA,NA,NA,NA,NA
4-8297594,CHR4,8297960,W4,iPLEX,AtMSQTsnp 267,ACGTTGGATGACTTTGGCCACTAACCCAAC,ACGTTGGATGCAACAGAACTTTGCATTGCC,90,98.2,74,47,36.8,d,F,6242.1,tcACCCAACTCTCTTCATTTT,C,6489.3,tcACCCAACTCTCTTCATTTTC,T,6569.2,tcACCCAACTCTCTTCATTTTT,NA,NA,NA,NA,NA,NA
1-1149096,CHR1,1149280,W4,iPLEX,AtMSQTsnp 10,ACGTTGGATGGCTATCTGAACGTCCATGTG,ACGTTGGATGCCAGTTCTGTAAACATGGGC,111,99.5,74,50.9,58.8,D,F,6349.1,ctccCGTCCATGTGGTTCAGC,A,6620.3,ctccCGTCCATGTGGTTCAGCA,G,6636.3,ctccCGTCCATGTGGTTCAGCG,NA,NA,NA,NA,NA,NA
3-19930188,CHR3,19930624,W4,iPLEX,AtMSQTsnp 235,ACGTTGGATGCTAAGTGGGACGCACATATT,ACGTTGGATGAATGAAGGCATCCTGGTGAG,110,95.7,74,45.5,33.3,,R,6422.2,GGACGCACATATTAATAACTA,G,6669.4,GGACGCACATATTAATAACTAC,A,6749.3,GGACGCACATATTAATAACTAT,NA,NA,NA,NA,NA,NA
3-7391896,CHR3,7392098,W4,iPLEX,AtMSQTsnp 205,ACGTTGGATGACAGAGCAACCTCTGTTTTC,ACGTTGGATGTGATTCCCTTTTCCAAACAC,109,92.7,74,45,33.3,d,R,6709.4,ccagAATGCTTTGAACGATCTT,T,6980.6,ccagAATGCTTTGAACGATCTTA,C,6996.6,ccagAATGCTTTGAACGATCTTG,NA,NA,NA,NA,NA,NA
2-12658576,CHR2,12658862,W4,iPLEX,AtMSQTsnp 156,ACGTTGGATGGCGATTTTAGGGTATTTTT,ACGTTGGATGGAAATAAACAATACGGACTC,97,68,74,50.4,36.4,d,F,6804.4,TGTGTGTGACGATGAATTATCA,C,7051.6,TGTGTGTGACGATGAATTATCAC,T,7131.5,TGTGTGTGACGATGAATTATCAT,NA,NA,NA,NA,NA,NA
1-16874305,CHR1,16874727,W4,iPLEX,AtMSQTsnp 65,ACGTTGGATGCGTAAATCGGTATCCCTGTC,ACGTTGGATGATAGGCATCGTTGCTTGGTG,103,100,74,48.3,47.4,D,R,6916.5,ctctGTATCCCTGTCTCCAGATT,G,7163.7,ctctGTATCCCTGTCTCCAGATTC,A,7243.6,ctctGTATCCCTGTCTCCAGATTT,NA,NA,NA,NA,NA,NA
2-14003272,CHR2,14003409,W4,iPLEX,AtMSQTsnp 164,ACGTTGGATGTAAATTTCGGATGCGTGCAA,ACGTTGGATGGAATATTCATCGCCTGCGTC,101,92,74,49.7,42.1,d,R,7093.6,tttgCGGATGCGTGCAATTAAAT,C,7380.8,tttgCGGATGCGTGCAATTAAATG,A,7420.7,tttgCGGATGCGTGCAATTAAATT,NA,NA,NA,NA,NA,NA
1-24071203,CHR1,24071689,W4,iPLEX,AtMSQTsnp 91,ACGTTGGATGGCAGCTTGCTCTCTTAGTTC,ACGTTGGATGCAGTTTTGTACTTCGTTCTC,118,93.1,74,45.2,28.6,d,F,7195.7,gaAAAGCAAGAAAATAATGAAGG,A,7467,gaAAAGCAAGAAAATAATGAAGGA,G,7483,gaAAAGCAAGAAAATAATGAAGGG,NA,NA,NA,NA,NA,NA
1-12357044,CHR1,12357583,W4,iPLEX,AtMSQTsnp 60,ACGTTGGATGGGTAATCACTTACTGTAAC,ACGTTGGATGATTGAGATCATCGCCAATGC,97,86.6,74,46,25,D,F,7291.8,CTTACTGTAACTTTTTTAAACGAT,A,7563,CTTACTGTAACTTTTTTAAACGATA,T,7618.9,CTTACTGTAACTTTTTTAAACGATT,NA,NA,NA,NA,NA,NA
5-23815354,CHR5,23815848,W4,iPLEX,AtMSQTsnp 406,ACGTTGGATGGCATGTGTCTATAGACATGG,ACGTTGGATGCATACATGACTTCAACAAAC,112,86,74,45.3,31.8,s,R,7513.9,cgGGTTATAGGAAAGAAGTGAATA,G,7761.1,cgGGTTATAGGAAAGAAGTGAATAC,A,7841,cgGGTTATAGGAAAGAAGTGAATAT,NA,NA,NA,NA,NA,NA
2-5803805,CHR2,5804076,W4,iPLEX,AtMSQTsnp 129,ACGTTGGATGTCAAGCTTAGGTGTAGGTGG,ACGTTGGATGTTTGCTGCTTTGAATGGTT,112,85.2,74,49.6,39.1,d,F,7520.9,gGGTGTAGGTGGAATATCAATAGA,A,7792.1,gGGTGTAGGTGGAATATCAATAGAA,G,7808.1,gGGTGTAGGTGGAATATCAATAGAG,NA,NA,NA,NA,NA,NA
2-12656716,CHR2,12657149,W4,iPLEX,AtMSQTsnp 155,ACGTTGGATGTGTTGAAATGTCTGTCTTG,ACGTTGGATGCTAGTTTAGCATTGCCTTAA,86,75.6,74,47.2,33.3,D,R,7651,gtgcCTGTCTTGATTCAGTTGTTTT,G,7898.1,gtgcCTGTCTTGATTCAGTTGTTTTC,A,7978.1,gtgcCTGTCTTGATTCAGTTGTTTTT,NA,NA,NA,NA,NA,NA
2-15986145,CHR2,15986354,W4,iPLEX,AtMSQTsnp 170,ACGTTGGATGGCTTTTGATTGTTTAGCTAAC,ACGTTGGATGGTTCCAACTCTTAGGAGTATG,102,79.1,74,48.9,38.1,sD,R,7725,gtgcTTGTTTAGCTAACTGTGTGTG,C,8012.2,gtgcTTGTTTAGCTAACTGTGTGTGG,A,8052.1,gtgcTTGTTTAGCTAACTGTGTGTGT,NA,NA,NA,NA,NA,NA
1-5628596,CHR1,5629159,W4,iPLEX,AtMSQTsnp 30,ACGTTGGATGAAACCGTTTTGTACCGGA,ACGTTGGATGACACTTGGGGTAAAATAAG,105,73.2,74,46.2,26.1,g,F,7930.2,aacATAATTGCAATATAAACCCTGTA,C,8177.4,aacATAATTGCAATATAAACCCTGTAC,T,8257.3,aacATAATTGCAATATAAACCCTGTAT,NA,NA,NA,NA,NA,NA
5-14215995,CHR5,14216131,W4,iPLEX,AtMSQTsnp 368,ACGTTGGATGGGAAGTTTCGGGTACCAAGA,ACGTTGGATGATTGGTATCTTAGGTCCAGC,103,97.3,74,51.5,45.5,d,F,7939.2,ctacGTTTCGGGTACCAAGACATAAC,A,8210.4,ctacGTTTCGGGTACCAAGACATAACA,G,8226.4,ctacGTTTCGGGTACCAAGACATAACG,NA,NA,NA,NA,NA,NA
1-12093079,CHR1,12093546,W4,iPLEX,AtMSQTsnp 58,ACGTTGGATGTCATTGGCTGCACATCTTTC,ACGTTGGATGGGGTCAAAGAGCAACATACG,115,97.7,74,45.3,27.3,d,F,8089.3,ggggTTGTGGATCCAAGTTAAATATA,C,8336.5,ggggTTGTGGATCCAAGTTAAATATAC,G,8376.5,ggggTTGTGGATCCAAGTTAAATATAG,NA,NA,NA,NA,NA,NA
3-297801,CHR3,298210,W4,iPLEX,AtMSQTsnp 186,ACGTTGGATGGTGAGAGCCAAACACTTTTTC,ACGTTGGATGCTCTGATAGATCTGCAGTGA,119,89.5,74,50.6,34.8,s,R,8138.3,cctcGAGCCAAACACTTTTTCCAATTA,T,8409.5,cctcGAGCCAAACACTTTTTCCAATTAA,A,8465.4,cctcGAGCCAAACACTTTTTCCAATTAT,NA,NA,NA,NA,NA,NA
1-9343234,CHR1,9343401,W4,iPLEX,AtMSQTsnp 47,ACGTTGGATGCGATTTTGCCCAAATTCAAG,ACGTTGGATGCCTAGTCATAGTTCATGCCG,120,92.9,74,52.3,34.8,D,R,8298.4,gagcTTTTGCCCAAATTCAAGTTGAGA,C,8585.6,gagcTTTTGCCCAAATTCAAGTTGAGAG,A,8625.5,gagcTTTTGCCCAAATTCAAGTTGAGAT,NA,NA,NA,NA,NA,NA
4-11579700,CHR4,11580143,W4,iPLEX,AtMSQTsnp 286,ACGTTGGATGGAACATTTCATACCTCTCTG,ACGTTGGATGGGATATGGTTCTTGCTTGAC,98,93,74,51.7,36,D,R,8521.6,aaaATTTCATACCTCTCTGTGTAGACAT,G,8768.8,aaaATTTCATACCTCTCTGTGTAGACATC,C,8808.8,aaaATTTCATACCTCTCTGTGTAGACATG,NA,NA,NA,NA,NA,NA
1-6375563,CHR1,6375605,W4,iPLEX,AtMSQTsnp 33,ACGTTGGATGATCGATTTTCTGTATGAAC,ACGTTGGATGTATACTAAAGAAAGCAAAAG,114,54.9,74,46,19.2,D,F,8554.6,ttAACATATTTCTTTGTTGATATTTTTG,G,8841.8,ttAACATATTTCTTTGTTGATATTTTTGG,T,8881.7,ttAACATATTTCTTTGTTGATATTTTTGT,NA,NA,NA,NA,NA,NA
5-7842900,CHR5,7842993,W4,iPLEX,AtMSQTsnp 360,ACGTTGGATGGACATGGTTTTCGATCTGGG,ACGTTGGATGGAGAGTAATCACAAGCCAAG,81,97.1,74,51.7,33.3,d,R,8668.6,gggtTTTTCGATCTGGGTTTAGTGTTTT,G,8915.8,gggtTTTTCGATCTGGGTTTAGTGTTTTC,T,8939.8,gggtTTTTCGATCTGGGTTTAGTGTTTTA,NA,NA,NA,NA,NA,NA
3-20482976,CHR3,20483289,W4,iPLEX,AtMSQTsnp 237,ACGTTGGATGAGCTGACCCGTGGTTACAAA,ACGTTGGATGTCAAGCCAACACCGTAATCC,110,97.1,74,57.8,54.2,D,R,8702.7,ggatCTGACCCGTGGTTACAAAGGGAAG,T,8973.9,ggatCTGACCCGTGGTTACAAAGGGAAGA,C,8989.9,ggatCTGACCCGTGGTTACAAAGGGAAGG,NA,NA,NA,NA,NA,NA